Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889686.1_cds_XP_016444391.1_39458
CDS Infomation

[gene=LOC107769668] [db_xref=GeneID:107769668] [protein=alpha-amylase-like] [protein_id=XP_016444391.1] [location=join(12768..12860,13018..13156,13653..14461,15222..15476)] [gbkey=CDS]
Sequence

ATGGAAAACAAAACAAACATAAACCTCATTTTCTCTGTGTGTCTTTTGCTGATTCTTTTG
CCTGCATTTGCATCTTCTACTTTGTTATTTCAGGGATTTAACTGGGAATCGTCGGGGCAA
GATGGAGGATGGTGGAACCATCTTATCAAATTAGTCCCAGATTTGGCTGATGCTGGAGTT
ACTCATGTTTGGCTTCCCCCTGCCTCAAATTCCCTTCAAAATCACAGCCAAGGGTATATG
CCATCAAGATTGTATGATTTGGACACATCAAGCTATGGAAATTCACGTGAACTTAAAGCC
TTAATCAAAGCCTTTCACGATAAAGGAATCAAATGTCTTGCTGATATAGTGATAAACCAT
AGATGGGCTGAAAACAAAGATAGAAGAGGAATCAACTGTTTATTTGAAGGTGGCACGCCT
GATAATAAGCTCGATTGGGGTCCGACCTTCATTTGTGGCAACGATACTAAATTTTCCGAT
GGCAAAGGAAATAATGATACTGGTTTAGATTGGGGAGATGCACCAGACATTGATCATGCT
AATCCACAAGTGCAAAAGGATTTATCAGATTGGATGAATTGGCTCAAAACTGAAATTGGA
TTTGATGGTTGGAGATTTGATATGGTCTTAGGATATGCACCTAAGTTCACTAAAATCTAC
ATGGACAATACTAAACCAGATTTTGCTGTTGGAGAATTTTTCTTGAAATTTAATAATAAA
CCGGATGGGAAACCGGACTATGATCAGCATAGAAATTATTTACTTCAGTGGGTTCAGAAT
GCAGGTGGTGTTGTGACAACATTTGATTTTACGACGAAAGGTATTCTTGGTACTGCTGTT
GGGGATACGAGATTCGATTTGTTGAAAGATTCTAAGGGACATCCTCCTGGAATGATTGGT
ATTTTGCCTCAGAATGCTGTGACTTTTATTGATAATCATGATACTTATTCGCAACAGCAA
TGGCCATTTCCTACTAATCCAAATGATAAAGTTACTCAGGGATATGCCTACATTCTAACT
CATCCTGGAATTCCATCAGTGTTCTATGACCATTTCTTTCTGTTCCAAGGGATGAGGAAA
CCAATCAAAGATTTGTATGCAGTTAGGAAGAGGAATGGAATTTCTGCAACAAGCAAAGTG
AAAATTTTGGCAGCACAAAATGATCTTTATGTGGCAAACATTGATGACAAAATCATTGTC
AAAATTGGACCTGGCAATGTTGGAAATCTTGTTCCATCTAATTTTCAATTGGCAACATCA
GGAGTTGATTATGCTGTATCGGAAAAGAAGGCATAA

Peptide Sequence

PEP ID

XP_016444391.1
PEP Infomation

PREDICTED: alpha-amylase-like [Nicotiana tabacum]
Sequence

MENKTNINLIFSVCLLLILLPAFASSTLLFQGFNWESSGQDGGWWNHLIKLVPDLADAGV
THVWLPPASNSLQNHSQGYMPSRLYDLDTSSYGNSRELKALIKAFHDKGIKCLADIVINH
RWAENKDRRGINCLFEGGTPDNKLDWGPTFICGNDTKFSDGKGNNDTGLDWGDAPDIDHA
NPQVQKDLSDWMNWLKTEIGFDGWRFDMVLGYAPKFTKIYMDNTKPDFAVGEFFLKFNNK
PDGKPDYDQHRNYLLQWVQNAGGVVTTFDFTTKGILGTAVGDTRFDLLKDSKGHPPGMIG
ILPQNAVTFIDNHDTYSQQQWPFPTNPNDKVTQGYAYILTHPGIPSVFYDHFFLFQGMRK
PIKDLYAVRKRNGISATSKVKILAAQNDLYVANIDDKIIVKIGPGNVGNLVPSNFQLATS
GVDYAVSEKKA

Transcript Sequence

Gene sequence data has not been registered.